STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrfACytochrome c552 nitrite reductase catalytic subunit NrfA; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (496 aa)    
Predicted Functional Partners:
nrfH
Cytochrome c nitrite reductase, small subunit NrfH; Pfam match to PF03264 Cytochrom_NNT, score 94.8, E-value 2.4E-025.
 
 0.999
napA
Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.980
napB
Periplasmic nitrate reductase, small subunit, cytochrome c-type protein NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
 
 0.955
gdhA
NADP-specific glutamate dehydrogenase; Pfam matches to PF00208 ELFV_dehydrog, score 458.9, E-value 5.7E-135, and to PF02812 ELFV_dehydrog_N, score 266.8, E-value 4E-077; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.909
glnA
Glutamine synthetase; Pfam matches to PF00120 Gln-synt_C, score 540.9, E-value 1.2E-159, and to PF03951 Gln-synt_N, score 134.6, E-value 2.5E-037; Belongs to the glutamine synthetase family.
     
 0.909
npd
2-nitropropane dioxygenase; Pfam match to PF03060 NPD, score 358.2, E-value 1.7E-105.
     
  0.900
nrfI
Cytochrome c biogenesis protein; Pfam match to PF01578 Cytochrom_C_asm, score 146.5, E-value 6.5E-041.
 
  
 0.860
napG
Fe-S ferredoxin-type protein NapG; Pfam match to PF00037 Fer4, score 25.4, E-value 3.3E-005.
 
  
 0.712
frdA
Fumarate reductase, flavoprotein subunit; Pfam matches to PF00890 FAD_binding_2, score 560.9, E-value 1.1E-165, and to PF02910 Succ_DH_flav_C, score 183.3, E-value 5.3E-052.
      
 0.696
xerD
Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Belongs to the 'phage' integrase family. XerH subfamily.
  
   
 0.667
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.