STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abu_1386Conserved hypothetical protein; Pfam match to PF05016 Plasmid_stabil, score 40.2, E-value 2.6E-010. (96 aa)    
Predicted Functional Partners:
Abu_1755
Conserved hypothetical protein.
   
 
 0.846
Abu_1387
Conserved hypothetical protein.
       0.773
Abu_1385
Hypothetical protein.
  
    0.609
Abu_1388
Conserved hypothetical membrane protein.
       0.512
Abu_1389
FlhB domain protein; Pfam match to PF01312 Bac_export_2, score 43.9, E-value 7E-013.
       0.512
Abu_2115
Conserved hypothetical protein; Pfam match to PF02687 FtsX, score 41.3, E-value 3E-009.
  
     0.488
Abu_2113
Conserved hypothetical protein.
  
     0.441
Abu_0738
Conserved hypothetical protein; Pfam match to PF05573 NosL, score 35.5, E-value 3.5E-010.
  
     0.427
recD
Exodeoxyribonuclease V, alpha subunit.
       0.421
Abu_1383
Conserved hypothetical protein.
       0.410
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.