STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Abu_1635Phosphohydrolase (MUTT/NUDIX family protein). (218 aa)    
Predicted Functional Partners:
nnrD
Conserved hypothetical protein, putative carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate deh [...]
  
 0.914
bioA
7,8-diaminopelargonic acid synthetase; Pfam match to PF00202 Aminotran_3, score 446.9, E-value 2.4E-131; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.777
Abu_1637
Two-component sensor histidine kinase; Pfam match to PF02518 HATPase_c, score 75, E-value 2.2E-019.
       0.628
rnr
Pfam match to PF00773 RNB, score 249.9, E-value 4.9E-072.
   
 0.574
Abu_0042
ATP-dependent RNA helicase, DEAD box family; Pfam matches to PF00270 DEAD, score 233.5, E-value 4.1E-067, and to PF00271 Helicase_C, score 128, E-value 1.8E-042; Belongs to the DEAD box helicase family.
   
 0.490
Abu_1116
Putative ATP-dependent RNA helicase RhlE; Pfam matches to PF00270 DEAD, score 144.4, E-value 2.7E-040, and to PF00271 Helicase_C, score 105.8, E-value 5.3E-035. Possible pseudogene/truncated protein. G:A transition (Met:Ile) at bp 1115517 results in a potential start codon shift to bp 1115285. Possible RBS present at bp 1115527-1115532.
   
 0.490
rhlE
ATP-dependent RNA helicase RhlE; Pfam matches to PF00270 DEAD, score 244.2, E-value 2.6E-070, and to PF00271 Helicase_C, score 115.1, E-value 3.9E-038; Belongs to the DEAD box helicase family.
   
 0.490
dbpA
ATP-dependent RNA helicase DbpA; Pfam matches to PF00270 DEAD, score 234.8, E-value 1.7E-067, and to PF00271 Helicase_C, score 104.1, E-value 1.9E-034, and to PF03880 DbpA, score 31.3, E-value 1.3E-006; Belongs to the DEAD box helicase family.
   
 0.490
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase; Pfam matches to PF01808 AICARFT_IMPCHas, score 301.2, E-value 6.9E-091, and to PF02142 MGS, score 179.3, E-value 8.4E-051.
       0.425
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.