Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cysA | cysD | Abu_2296 | Abu_2174 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | 0.982 |
| cysA | cysH | Abu_2296 | Abu_2173 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.830 |
| cysA | cysI | Abu_2296 | Abu_2176 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfite reductase, iron-sulfur subunit; Pfam match to PF01077 NIR_SIR, score 49.1, E-value 1.4E-011. | 0.609 |
| cysA | cysJ | Abu_2296 | Abu_0730 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfite reductase, flavoprotein component; Pfam match to PF03929 DUF337, score 135, E-value 1E-032. | 0.827 |
| cysA | cysNC | Abu_2296 | Abu_2175 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Bifunctional ATP sulfurylase, subunit 1/Adenylyl-sulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.982 |
| cysA | cysT | Abu_2296 | Abu_2298 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.998 |
| cysA | cysW | Abu_2296 | Abu_2297 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate transport system permease protein; Pfam match to PF00528 BPD_transp_1, score 68.2, E-value 2.3E-017. | 0.998 |
| cysA | nirA | Abu_2296 | Abu_2013 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Ferredoxin-nitrite reductase; Pfam matches to PF01077 NIR_SIR, score 147.2, E-value 3.9E-041, and to PF03460 NIR_SIR_ferr, score 39.1, E-value 1.4E-008, and to PF01077 NIR_SIR, score 35.8, E-value 1.4E-007; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.609 |
| cysA | sbp | Abu_2296 | Abu_2302 | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate-binding protein precursor; Pfam match to PF01547 SBP_bac_1, score 32.1, E-value 1.8E-006. | 0.996 |
| cysD | cysA | Abu_2174 | Abu_2296 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.982 |
| cysD | cysH | Abu_2174 | Abu_2173 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.995 |
| cysD | cysI | Abu_2174 | Abu_2176 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Sulfite reductase, iron-sulfur subunit; Pfam match to PF01077 NIR_SIR, score 49.1, E-value 1.4E-011. | 0.957 |
| cysD | cysJ | Abu_2174 | Abu_0730 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Sulfite reductase, flavoprotein component; Pfam match to PF03929 DUF337, score 135, E-value 1E-032. | 0.843 |
| cysD | cysNC | Abu_2174 | Abu_2175 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Bifunctional ATP sulfurylase, subunit 1/Adenylyl-sulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
| cysD | cysT | Abu_2174 | Abu_2298 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.989 |
| cysD | cysW | Abu_2174 | Abu_2297 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Sulfate transport system permease protein; Pfam match to PF00528 BPD_transp_1, score 68.2, E-value 2.3E-017. | 0.991 |
| cysD | modD | Abu_2174 | Abu_0009 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Molybdenum ABC transporter, ATP-binding protein; Pfam match to PF00005 ABC_tran, score 202.3, E-value 1.1E-057. | 0.830 |
| cysD | nirA | Abu_2174 | Abu_2013 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Ferredoxin-nitrite reductase; Pfam matches to PF01077 NIR_SIR, score 147.2, E-value 3.9E-041, and to PF03460 NIR_SIR_ferr, score 39.1, E-value 1.4E-008, and to PF01077 NIR_SIR, score 35.8, E-value 1.4E-007; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.830 |
| cysD | sbp | Abu_2174 | Abu_2302 | ATP sulfurylase, small subunit; Pfam match to PF01507 PAPS_reduct, score 439.7, E-value 3.7E-129. | Sulfate-binding protein precursor; Pfam match to PF01547 SBP_bac_1, score 32.1, E-value 1.8E-006. | 0.990 |
| cysH | cysA | Abu_2173 | Abu_2296 | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | Sulfate ABC transporter (ATP-binding protein); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.830 |
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