STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknA2Probable serine-threonine protein kinase pknA2; COG family: serine_threonine proteinkinases; Orthologue of BL1425; PFAM_ID: pkinase. (732 aa)    
Predicted Functional Partners:
garA
Possible signal transduction protein; COG family: FHA-domain-containing proteins; Orthologue of BL0747; PFAM_ID: FHA.
 
 
 
 0.999
BAD_0042
Possible phosphoprotein phosphatase; COG family: protein serine_threonine phosphatases; Orthologue of BL0585.
 
 0.929
ppp
Probable phosphoprotein phosphatase; COG family: protein serine_threoninephosphatases; Orthologue of BL1202; PFAM_ID: PP2C.
 
 0.929
BAD_0044
Hypothetical protein; COG family: FHA-domain-containing proteins; Orthologue of BL0583; PFAM_ID: FHA.
 
 
 
 0.801
BAD_0043
Hypothetical protein; COG family: FHA-domain-containing proteins; Orthologue of BL0584; PFAM_ID: FHA.
 
 
 
 0.761
idsA
Probably bifunctional short chain isoprenyl diphosphate synthase; COG family: geranylgeranyl pyrophosphatesynthase; Orthologue of BL1426; PFAM_ID: polyprenyl_synt; includes: farnesylpyrophosphate synthetase (Fpp synthetase)(dimethylallyltransferase); geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
    0.689
BAD_1358
Possible Etk-like tyrosine kinase involved in Eps biosynthesis; COG family: ATPases involved in chromosomepartitioning; Orthologue of BL1229.
    
   0.659
BAD_1612
Widely conserved protein with eukaryotic protein kinase domain; COG family: serine_threonine protein kinases; Orthologue of BL0660; PFAM_ID: pkinase.
 
  
0.609
BAD_1310
COG family: serine_threonine protein kinases; PFAM_ID: pkinase.
 
  
0.608
BAD_1012
Hypothetical protein; Orthologue of BL1427.
       0.580
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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