STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAD_1622Hypothetical protein; Orthologue of BL0650. (675 aa)    
Predicted Functional Partners:
BAD_0044
Hypothetical protein; COG family: FHA-domain-containing proteins; Orthologue of BL0583; PFAM_ID: FHA.
  
 
 
 0.976
BAD_1621
COG family: uncharacterized membrane protein_putative virulence factor; Orthologue of BL0651; PFAM_ID: MVIN.
     0.938
BAD_1620
Hypothetical protein; Orthologue of BL0652.
 
     0.918
BAD_0250
Hypothetical protein; Orthologue of BL1532.
 
     0.769
BAD_1106
Hypothetical protein; COG family: UDP-N-acetylmuramyl tripeptidesynthase; Orthologue of BL1318.
  
   
 0.765
BAD_0775
Hypothetical protein; COG family: periplasmic sugar-binding proteins; Orthologue of BL1498.
  
     0.762
BAD_0953
Hypothetical protein; Orthologue of BL0051.
 
    0.755
BAD_1133
Hypothetical protein; COG family: ATPase involved in DNA repair; Orthologue of BL0121.
  
    0.745
BAD_0660
Hypothetical protein; COG family: predicted glycosyltransferases; Orthologue of BL1007.
 
    0.742
BAD_0954
Hypothetical protein; Orthologue of BL0050.
  
    0.739
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
Server load: low (26%) [HD]