STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_0017Deoxynucleoside 5'-monophosphate N-glycosidase; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family. (143 aa)    
Predicted Functional Partners:
Tpen_0016
Hypothetical protein.
       0.773
Tpen_0015
Hypothetical protein.
       0.671
Tpen_0018
PFAM: regulatory protein, AsnC/Lrp family; KEGG: pab:PAB1236 transcriptional regulator.
       0.636
Tpen_0019
Hypothetical protein.
       0.533
Tpen_0471
PFAM: DNA-binding TFAR19-related protein; KEGG: ape:APE1088a DNA-binding protein; Belongs to the PDCD5 family.
  
     0.423
Tpen_0788
PFAM: chemotaxis sensory transducer; KEGG: pai:PAE1451 hypothetical protein.
  
     0.406
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.