node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rpl1 | rpl10 | Tpen_0223 | Tpen_0222 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rpl1 | rpl11 | Tpen_0223 | Tpen_0224 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.999 |
rpl1 | rpl15 | Tpen_0223 | Tpen_0234 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rpl1 | rpl2 | Tpen_0223 | Tpen_0227 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
rpl1 | rpl23 | Tpen_0223 | Tpen_0228 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rpl1 | rpl3 | Tpen_0223 | Tpen_0230 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
rpl1 | rpl30 | Tpen_0223 | Tpen_0235 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: neq:NEQ311 LSU ribosomal protein L30P. | 0.999 |
rpl1 | rps13 | Tpen_0223 | Tpen_0259 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rpl1 | rps19 | Tpen_0223 | Tpen_0225 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rpl1 | rps5 | Tpen_0223 | Tpen_0236 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.999 |
rpl10 | rpl1 | Tpen_0222 | Tpen_0223 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | 0.999 |
rpl10 | rpl11 | Tpen_0222 | Tpen_0224 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.999 |
rpl10 | rpl15 | Tpen_0222 | Tpen_0234 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rpl10 | rpl2 | Tpen_0222 | Tpen_0227 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
rpl10 | rpl23 | Tpen_0222 | Tpen_0228 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rpl10 | rpl3 | Tpen_0222 | Tpen_0230 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
rpl10 | rpl30 | Tpen_0222 | Tpen_0235 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: neq:NEQ311 LSU ribosomal protein L30P. | 0.999 |
rpl10 | rps13 | Tpen_0222 | Tpen_0259 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rpl10 | rps19 | Tpen_0222 | Tpen_0225 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rpl10 | rps5 | Tpen_0222 | Tpen_0236 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.999 |