node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tpen_0376 | Tpen_0391 | Tpen_0376 | Tpen_0391 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | 0.981 |
Tpen_0376 | Tpen_0512 | Tpen_0376 | Tpen_0512 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mja:MJ0443 hypothetical protein. | 0.984 |
Tpen_0376 | Tpen_1772 | Tpen_0376 | Tpen_1772 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | PFAM: THUMP domain protein; KEGG: ape:APE1156 hypothetical protein. | 0.401 |
Tpen_0376 | nep1 | Tpen_0376 | Tpen_0557 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | Suppressor Mra1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.999 |
Tpen_0376 | rpl7ae | Tpen_0376 | Tpen_0493 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.999 |
Tpen_0376 | rps15 | Tpen_0376 | Tpen_0515 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: mka:MK1593 ribosomal protein S15P/S13E. | 0.952 |
Tpen_0376 | rtcA | Tpen_0376 | Tpen_0217 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | RNA-3'-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.952 |
Tpen_0376 | tmcA | Tpen_0376 | Tpen_0686 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | Protein of unknown function DUF699, ATPase putative; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.999 |
Tpen_0376 | truB | Tpen_0376 | Tpen_0461 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | Putative rRNA pseudouridine synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.995 |
Tpen_0376 | truD | Tpen_0376 | Tpen_0685 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | Pseudouridylate synthase; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.556 |
Tpen_0391 | Tpen_0376 | Tpen_0391 | Tpen_0376 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | 0.981 |
Tpen_0391 | Tpen_0512 | Tpen_0391 | Tpen_0512 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mja:MJ0443 hypothetical protein. | 0.775 |
Tpen_0391 | nep1 | Tpen_0391 | Tpen_0557 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | Suppressor Mra1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.539 |
Tpen_0391 | rpl7ae | Tpen_0391 | Tpen_0493 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.890 |
Tpen_0391 | rps15 | Tpen_0391 | Tpen_0515 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: mka:MK1593 ribosomal protein S15P/S13E. | 0.504 |
Tpen_0391 | rtcA | Tpen_0391 | Tpen_0217 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | RNA-3'-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.807 |
Tpen_0391 | tmcA | Tpen_0391 | Tpen_0686 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | Protein of unknown function DUF699, ATPase putative; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.946 |
Tpen_0391 | truB | Tpen_0391 | Tpen_0461 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | Putative rRNA pseudouridine synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.909 |
Tpen_0391 | truD | Tpen_0391 | Tpen_0685 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Nucleolar GTP-binding 1; KEGG: pai:PAE3626 hypothetical protein. | Pseudouridylate synthase; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.806 |
Tpen_0512 | Tpen_0376 | Tpen_0512 | Tpen_0376 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mja:MJ0443 hypothetical protein. | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: ape:APE2199 nucleolar protein NOP5. | 0.984 |