STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC61706.1Predicted transcription factor, homolog of eukaryotic MBF1. (132 aa)    
Predicted Functional Partners:
SKC79859.1
Transcriptional regulator, contains XRE-family HTH domain.
 
     0.745
SKC66324.1
Predicted transcriptional regulator.
  
     0.727
SKC35783.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
     0.724
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.713
SKC77489.1
Predicted transcriptional regulator.
 
     0.706
SKC61694.1
Hypothetical protein.
  
    0.701
SKC80055.1
Predicted transcriptional regulators.
  
     0.658
SKC82863.1
Predicted transcriptional regulator.
  
     0.525
SKC85729.1
Aspartate kinase; Belongs to the aspartokinase family.
  
  
  0.411
SKC81294.1
Chorismate mutase.
    
 0.401
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.