STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC79262.1Multimeric flavodoxin WrbA. (191 aa)    
Predicted Functional Partners:
SKC79257.1
Hypothetical protein.
       0.693
SKC54171.1
Protein of unknown function.
  
  
 0.575
SKC79272.1
Hypothetical protein.
       0.565
cobT
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.556
SKC79277.1
Protein N-acetyltransferase, RimJ/RimL family.
 
     0.530
SKC76081.1
Nitroreductase.
  
 
 0.502
SKC63235.1
Nitroreductase.
  
 
 0.497
SKC71925.1
Nitroreductase.
  
 
 0.470
SKC85424.1
Uncharacterized protein TIGR03905.
  
     0.460
SKC48641.1
Flavorubredoxin.
 
 
  0.457
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.