STRINGSTRING
yhcM protein (Wigglesworthia glossinidia Gb) - STRING interaction network
"yhcM" - Hypothetical protein in Wigglesworthia glossinidia Gb
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhcMHypothetical protein (368 aa)    
Predicted Functional Partners:
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (142 aa)
              0.786
rpsI
30S ribosomal protein S9 (129 aa)
   
        0.768
sucA
2-oxoglutarate dehydrogenase E1 component (909 aa)
 
        0.691
sdhB
Succinate dehydrogenase iron-sulfur subunit (247 aa)
 
        0.617
sucB
Hypothetical protein (413 aa)
 
        0.610
yhcB
Hypothetical protein (123 aa)
              0.605
sdhD
Hypothetical protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH) (113 aa)
 
          0.575
sucC
Hypothetical protein (396 aa)
              0.472
sucD
Hypothetical protein (296 aa)
              0.472
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (151 aa)
              0.464
Your Current Organism:
Wigglesworthia glossinidia Gb
NCBI taxonomy Id: 36870
Other names: Glossina brevipalpis P-endosymbiont, W. glossinidia endosymbiont of Glossina brevipalpis, Wigglesworthia brevipalpis, Wigglesworthia glossinidia Gb, Wigglesworthia glossinidia brevipalpis, Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
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