STRINGSTRING
ybgF protein (Wigglesworthia glossinidia Gb) - STRING interaction network
"ybgF" - Hypothetical protein in Wigglesworthia glossinidia Gb
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybgFHypothetical protein (251 aa)    
Predicted Functional Partners:
tolB
Hypothetical protein; Involved in the TonB-independent uptake of proteins (431 aa)
 
   
  0.990
tolQ
Hypothetical protein (235 aa)
 
     
  0.965
tolR
Hypothetical protein (137 aa)
   
   
  0.954
pal
Hypothetical protein (170 aa)
 
        0.951
tolA
Hypothetical protein (251 aa)
   
 
  0.950
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (361 aa)
         
  0.842
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (626 aa)
         
  0.703
ftsH
Hypothetical protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (638 aa)
 
          0.697
glnA
Hypothetical protein (467 aa)
           
  0.697
ycfU
Hypothetical protein (401 aa)
   
 
      0.550
Your Current Organism:
Wigglesworthia glossinidia Gb
NCBI taxonomy Id: 36870
Other names: Glossina brevipalpis P-endosymbiont, W. glossinidia endosymbiont of Glossina brevipalpis, Wigglesworthia brevipalpis, Wigglesworthia glossinidia Gb, Wigglesworthia glossinidia brevipalpis, Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
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