STRINGSTRING
sdhC protein (Wigglesworthia glossinidia Gb) - STRING interaction network
"sdhC" - Hypothetical protein in Wigglesworthia glossinidia Gb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhCHypothetical protein (139 aa)    
Predicted Functional Partners:
sdhD
Hypothetical protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH) (113 aa)
 
   
    0.992
sdhA
Succinate dehydrogenase flavoprotein subunit (588 aa)
       
    0.966
sdhB
Succinate dehydrogenase iron-sulfur subunit (247 aa)
       
    0.966
sucC
Hypothetical protein (396 aa)
       
    0.943
sucD
Hypothetical protein (296 aa)
       
    0.943
fumC
Fumarate hydratase; Catalyzes the reversible addition of water to fumarate to give L-malate (464 aa)
         
    0.900
aspC
Aromatic amino acid aminotransferase (398 aa)
         
    0.800
sucA
2-oxoglutarate dehydrogenase E1 component (909 aa)
              0.608
sucB
Hypothetical protein (413 aa)
              0.589
ybgI
Hypothetical protein (249 aa)
              0.565
Your Current Organism:
Wigglesworthia glossinidia Gb
NCBI taxonomy Id: 36870
Other names: Glossina brevipalpis P-endosymbiont, W. glossinidia endosymbiont of Glossina brevipalpis, Wigglesworthia brevipalpis, Wigglesworthia glossinidia Gb, Wigglesworthia glossinidia brevipalpis, Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
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