STRINGSTRING
WIGBR4380 protein (Wigglesworthia glossinidia Gb) - STRING interaction network
"WIGBR4380" - Hypothetical protein in Wigglesworthia glossinidia Gb
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WIGBR4380Hypothetical protein (84 aa)    
Predicted Functional Partners:
recJ
Hypothetical protein (580 aa)
              0.802
ygfZ
Hypothetical protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication (309 aa)
   
        0.792
sdhA
Succinate dehydrogenase flavoprotein subunit (588 aa)
   
 
  0.785
secE
Hypothetical protein (127 aa)
   
          0.755
sdhB
Succinate dehydrogenase iron-sulfur subunit (247 aa)
   
 
  0.672
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (136 aa)
     
        0.620
sdhD
Hypothetical protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH) (113 aa)
 
          0.605
mfd
Hypothetical protein (685 aa)
              0.528
rnc
Hypothetical protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (226 aa)
 
          0.495
prfB
Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (278 aa)
   
        0.446
Your Current Organism:
Wigglesworthia glossinidia Gb
NCBI taxonomy Id: 36870
Other names: Glossina brevipalpis P-endosymbiont, W. glossinidia endosymbiont of Glossina brevipalpis, Wigglesworthia brevipalpis, Wigglesworthia glossinidia Gb, Wigglesworthia glossinidia brevipalpis, Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
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