STRINGSTRING
ytfN protein (Wigglesworthia glossinidia Gb) - STRING interaction network
"ytfN" - Hypothetical protein in Wigglesworthia glossinidia Gb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfNHypothetical protein (749 aa)    
Predicted Functional Partners:
ytfM
Hypothetical protein (579 aa)
 
 
  0.999
bamA
Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery (805 aa)
 
     
  0.874
slyA
Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes (144 aa)
         
  0.847
Wg004
Hypothetical protein (239 aa)
            0.840
fliC
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (421 aa)
 
     
  0.752
ackA
Hypothetical protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (399 aa)
         
  0.701
lolA
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (206 aa)
   
        0.659
imp
Hypothetical protein (723 aa)
 
 
      0.596
plsB
Glycerol-3-phosphate acyltransferase (794 aa)
   
 
      0.587
mreD
Hypothetical protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins (168 aa)
   
      0.521
Your Current Organism:
Wigglesworthia glossinidia Gb
NCBI taxonomy Id: 36870
Other names: Glossina brevipalpis P-endosymbiont, W. glossinidia endosymbiont of Glossina brevipalpis, Wigglesworthia brevipalpis, Wigglesworthia glossinidia Gb, Wigglesworthia glossinidia brevipalpis, Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
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