Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LELG_01878 | LELG_01884 | A5DWZ1 | A5DWZ7 | Small nuclear ribonucleoprotein Sm D2. | Matrin-type domain-containing protein. | 0.995 |
LELG_01878 | LELG_01954 | A5DWZ1 | A5DX67 | Small nuclear ribonucleoprotein Sm D2. | Tr-type G domain-containing protein. | 0.996 |
LELG_01878 | LELG_02100 | A5DWZ1 | A5DXL3 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.986 |
LELG_01878 | LELG_03537 | A5DWZ1 | A5E1Q0 | Small nuclear ribonucleoprotein Sm D2. | TPR_REGION domain-containing protein. | 0.994 |
LELG_01878 | LELG_04121 | A5DWZ1 | A5E3D4 | Small nuclear ribonucleoprotein Sm D2. | Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. | 0.921 |
LELG_01878 | LELG_04124 | A5DWZ1 | A5E3D7 | Small nuclear ribonucleoprotein Sm D2. | WD_REPEATS_REGION domain-containing protein. | 0.963 |
LELG_01878 | LELG_04634 | A5DWZ1 | A5E4U5 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
LELG_01878 | LELG_05254 | A5DWZ1 | A5E6L5 | Small nuclear ribonucleoprotein Sm D2. | Sm domain-containing protein. | 0.999 |
LELG_01878 | LELG_05647 | A5DWZ1 | A5E7Q8 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.994 |
LELG_01878 | PRP28 | A5DWZ1 | A5DU73 | Small nuclear ribonucleoprotein Sm D2. | Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity). | 0.979 |
LELG_01884 | LELG_01878 | A5DWZ7 | A5DWZ1 | Matrin-type domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
LELG_01884 | LELG_01954 | A5DWZ7 | A5DX67 | Matrin-type domain-containing protein. | Tr-type G domain-containing protein. | 0.757 |
LELG_01884 | LELG_03537 | A5DWZ7 | A5E1Q0 | Matrin-type domain-containing protein. | TPR_REGION domain-containing protein. | 0.623 |
LELG_01884 | LELG_04124 | A5DWZ7 | A5E3D7 | Matrin-type domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.568 |
LELG_01884 | LELG_04634 | A5DWZ7 | A5E4U5 | Matrin-type domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.992 |
LELG_01884 | LELG_05254 | A5DWZ7 | A5E6L5 | Matrin-type domain-containing protein. | Sm domain-containing protein. | 0.991 |
LELG_01884 | LELG_05647 | A5DWZ7 | A5E7Q8 | Matrin-type domain-containing protein. | Uncharacterized protein. | 0.741 |
LELG_01884 | PRP28 | A5DWZ7 | A5DU73 | Matrin-type domain-containing protein. | Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity). | 0.955 |
LELG_01954 | LELG_01878 | A5DX67 | A5DWZ1 | Tr-type G domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.996 |
LELG_01954 | LELG_01884 | A5DX67 | A5DWZ7 | Tr-type G domain-containing protein. | Matrin-type domain-containing protein. | 0.757 |
page 1 of 6