Groups of genes that are frequently observed in each other's genomic neighborhood.
Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Predicted protein (303 aa)
Predicted Functional Partners:
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PAL9_POPTR] (593 aa)
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002300960.1]; Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) (444 aa)
Predicted protein; Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) (442 aa)
Predicted protein (360 aa)
Precursor of carboxylase t-protein 1, glycine decarboxylase complex [source-UniProtKB/TrEMBL;Acc-B9HZ70_POPTR]; The glycine cleavage system catalyzes the degradation of glycine (408 aa)
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PF34_POPTR]; The glycine cleavage system catalyzes the degradation of glycine (408 aa)
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEP3_POPTR]; Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) (448 aa)
Predicted protein; Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) (456 aa)
Your Current Organism:
NCBI taxonomy Id: 3694 Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family