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POPTR_0001s02860.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s02860.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s02860.1Predicted protein (375 aa)    
Predicted Functional Partners:
POPTR_0003s19810.1
Uridine 5’-monophosphate synthase family protein (452 aa)
   
 
  0.961
POPTR_0001s06360.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHV8_POPTR] (475 aa)
   
 
  0.961
POPTR_0803s00200.1
Amidophosphoribosyltransferase (586 aa)
   
  0.948
POPTR_0009s12850.1
Amidophosphoribosyltransferase [source-UniProtKB/TrEMBL;Acc-A9PE93_POPTR] (585 aa)
   
  0.948
POPTR_0004s17100.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002306109.1] (586 aa)
   
  0.948
POPTR_0013s03700.1
Predicted protein (287 aa)
   
 
  0.931
POPTR_0011s15900.1
Predicted protein (285 aa)
   
 
  0.931
POPTR_0010s12560.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P9K7_POPTR] (265 aa)
   
 
  0.931
POPTR_0008s12650.1
Predicted protein (264 aa)
   
 
  0.931
POPTR_0005s05360.1
Predicted protein (290 aa)
   
 
  0.931
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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