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PtrEXPA10 protein (Populus trichocarpa) - STRING interaction network
"PtrEXPA10" - Expansin S1 family protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
PtrEXPA10Expansin S1 family protein; Putative uncharacterized protein PtrEXPA10 [source-UniProtKB/TrEMBL;Acc-B9GLB0_POPTR] (247 aa)    
Predicted Functional Partners:
POPTR_0007s11600.1
Multi-copper oxidase type 1 family protein; Multicopper oxidase (538 aa)
           
  0.603
POPTR_0003s07460.1
Pectinesterase (367 aa)
     
   
  0.581
CYP711A7
annotation not available (529 aa)
           
  0.575
POPTR_0013s01250.1
Drought-responsive family protein (220 aa)
           
  0.575
CYP711A8
Uncharacterized protein; Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9HDD3_POPTR] (529 aa)
           
  0.575
POPTR_0005s02080.1
Drought-responsive family protein (220 aa)
           
  0.575
POPTR_0003s13890.1
Glycoside hydrolase family 28 family protein (447 aa)
           
  0.475
POPTR_0010s11480.1
Integral membrane family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEU8_POPTR] (247 aa)
           
  0.465
POPTR_0004s24210.1
Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (394 aa)
           
  0.461
POPTR_0003s03720.1
Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (394 aa)
           
  0.461
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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