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POPTR_0001s04010.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s04010.1" - Cytochrome P450 [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s04010.1Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9GLC4_POPTR] (483 aa)    
Predicted Functional Partners:
POPTR_0005s02960.1
Cytochrome P450 (CYP76G4), mRNA [source-RefSeq DNA_predicted;Acc-XM_002332594.1] (447 aa)
   
   
  0.711
POPTR_0005s02950.1
Cytochrome P450, mRNA [source-RefSeq DNA_predicted;Acc-XM_002332590.1] (447 aa)
   
   
  0.703
POPTR_0005s02940.1
Cytochrome P450 (447 aa)
   
   
  0.688
POPTR_0015s04540.1
Predicted protein (485 aa)
     
 
  0.651
POPTR_0014s17540.1
Predicted protein (152 aa)
     
  0.645
POPTR_0011s17080.1
Uncharacterized protein (104 aa)
     
  0.645
POPTR_0010s24560.1
Predicted protein (155 aa)
     
  0.645
POPTR_0010s09740.1
Predicted protein (144 aa)
     
  0.645
POPTR_0009s16540.1
Predicted protein (150 aa)
     
  0.645
POPTR_0008s15310.1
Predicted protein (144 aa)
     
  0.645
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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