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POPTR_0001s07940.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s07940.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s07940.1Predicted protein (392 aa)    
Predicted Functional Partners:
POPTR_0003s19810.1
Uridine 5’-monophosphate synthase family protein (452 aa)
         
  0.614
POPTR_0001s06360.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHV8_POPTR] (475 aa)
         
  0.614
POPTR_0009s12200.1
Dihydrofolate reductase-thymidylate synthase [source-UniProtKB/TrEMBL;Acc-B9HRK6_POPTR]; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
   
 
    0.597
POPTR_0004s16470.1
Bifunctional dihydrofolate reductase-thymidylate synthase [source-UniProtKB/TrEMBL;Acc-B9H0T4_POPTR]; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
   
 
    0.597
POPTR_0018s05150.1
Uncharacterized protein (804 aa)
         
  0.585
POPTR_0006s24570.1
Precursor of carboxylase p-protein 1, glycine decarboxylase complex [source-UniProtKB/TrEMBL;Acc-B9HDN2_POPTR] (1060 aa)
         
  0.585
POPTR_0006s08450.1
Predicted protein (153 aa)
     
 
  0.577
POPTR_0010s24530.1
Predicted protein (141 aa)
     
 
  0.576
POPTR_0008s02130.1
Predicted protein (141 aa)
     
 
  0.576
POPTR_0007s06760.1
Uncharacterized protein (69 aa)
     
 
  0.576
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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