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POPTR_0001s07980.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s07980.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
POPTR_0001s07980.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PH36_POPTR] (374 aa)    
Predicted Functional Partners:
POPTR_0014s12740.1
Predicted protein (1643 aa)
     
   
  0.541
POPTR_0002s21000.1
Predicted protein (1550 aa)
     
   
  0.539
POPTR_0013s02090.1
Predicted protein (1429 aa)
           
  0.529
POPTR_0005s02840.1
Uncharacterized protein (1330 aa)
           
  0.529
POPTR_0003s19730.1
Chromatin remodeling complex subunit [source-UniProtKB/TrEMBL;Acc-B9GWX1_POPTR] (1333 aa)
           
  0.529
POPTR_0005s17160.1
Methyl binding domain protein [source-UniProtKB/TrEMBL;Acc-B9H725_POPTR] (1248 aa)
     
   
  0.507
POPTR_0002s09790.1
Methyl binding domain protein [source-UniProtKB/TrEMBL;Acc-B9GUW9_POPTR] (1276 aa)
           
  0.495
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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