• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
POPTR_0001s10460.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s10460.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s10460.1Uncharacterized protein (349 aa)    
Predicted Functional Partners:
ANS1
Leucoanthocyanidin dioxygenase family protein; Anthocyanidin synthase [source-UniProtKB/TrEMBL;Acc-B9GW40_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (361 aa)
       
 
  0.679
ANS2
Leucoanthocyanidin dioxygenase family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHZ9_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (360 aa)
       
 
  0.679
POPTR_0019s06950.1
Uncharacterized protein (683 aa)
           
  0.674
POPTR_0013s07980.1
Uncharacterized protein (729 aa)
           
  0.674
POPTR_1289s00200.1
annotation not available (220 aa)
   
 
 
  0.604
POPTR_0002s24530.1
Zinc finger family protein (396 aa)
           
  0.599
POPTR_0005s19460.1
Uncharacterized protein (326 aa)
           
  0.483
POPTR_0005s19450.1
Uncharacterized protein (697 aa)
           
  0.483
POPTR_0002s11070.1
Uncharacterized protein (642 aa)
           
  0.483
F3H3
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEF4_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (363 aa)
       
 
  0.477
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (8%) [HD]