POPTR_0001s11260.1 protein (Populus trichocarpa)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

POPTR_0001s11260.1

Uncharacterized protein (217 aa)

Predicted Functional Partners:

POPTR_0015s04720.1

0.661

POPTR_0098s00200.1

0.451

POPTR_0014s02290.1

0.451

POPTR_0013s10050.1

0.451

POPTR_0011s12080.1

0.451

POPTR_0010s25600.1

0.451

POPTR_0010s07420.1

0.451

POPTR_0009s09950.1

0.451

POPTR_0008s01000.1

0.451

POPTR_0002s12420.1

0.451

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family

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... protein annotations:

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
POPTR_0001s11260.1	POPTR_0002s12420.1	Uncharacterized protein	Predicted protein	0.451
POPTR_0001s11260.1	POPTR_0008s01000.1	Uncharacterized protein	Predicted protein	0.451
POPTR_0001s11260.1	POPTR_0009s09950.1	Uncharacterized protein	Predicted protein	0.451
POPTR_0001s11260.1	POPTR_0010s07420.1	Uncharacterized protein	Predicted protein	0.451
POPTR_0001s11260.1	POPTR_0010s25600.1	Uncharacterized protein	Predicted protein	0.451
POPTR_0001s11260.1	POPTR_0011s12080.1	Uncharacterized protein	Predicted protein	0.451
POPTR_0001s11260.1	POPTR_0013s10050.1	Uncharacterized protein	Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PI34_POPTR]	0.451
POPTR_0001s11260.1	POPTR_0014s02290.1	Uncharacterized protein	Predicted protein	0.451
POPTR_0001s11260.1	POPTR_0015s04720.1	Uncharacterized protein	Predicted protein	0.661
POPTR_0001s11260.1	POPTR_0098s00200.1	Uncharacterized protein	Uncharacterized protein	0.451
POPTR_0002s12420.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.451
POPTR_0008s01000.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.451
POPTR_0009s09950.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.451
POPTR_0010s07420.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.451
POPTR_0010s25600.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.451
POPTR_0011s12080.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.451
POPTR_0013s10050.1	POPTR_0001s11260.1	Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PI34_POPTR]	Uncharacterized protein	0.451
POPTR_0014s02290.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.451
POPTR_0015s04720.1	POPTR_0001s11260.1	Predicted protein	Uncharacterized protein	0.661
POPTR_0098s00200.1	POPTR_0001s11260.1	Uncharacterized protein	Uncharacterized protein	0.451

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Cooccurrence

Textmining

Coexpression

Experiments

Fusion

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