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POPTR_0001s11350.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s11350.1" - Cys/Met metabolism pyridoxal-phosphate-dependent enzyme family protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s11350.1Cys/Met metabolism pyridoxal-phosphate-dependent enzyme family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PI56_POPTR] (454 aa)    
Predicted Functional Partners:
MMT
Methionine s-methyltransferase [source-UniProtKB/TrEMBL;Acc-B9N0J3_POPTR] (1095 aa)
         
  0.932
POPTR_0001s37570.1
Pyridoxal-5’-phosphate-dependent enzyme family protein (424 aa)
   
  0.853
POPTR_0274s00200.1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (392 aa)
   
  0.850
MS4
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase family protein; Vitamin-b12 independent methionine synthase, 5-methyltetrahydropteroyltriglutamate-homocysteine [source-UniProtKB/TrEMBL;Acc-B9IPT1_POPTR] (765 aa)
   
 
  0.848
MS3
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PBU6_POPTR] (765 aa)
   
 
  0.848
MS2
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PII3_POPTR] (813 aa)
   
 
  0.848
MS1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P805_POPTR] (817 aa)
   
 
  0.848
POPTR_0017s12240.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PID6_POPTR] (548 aa)
         
0.838
HMT2
Homocysteine S-methyltransferase 3 family protein; Homocysteine s-methyltransferase [source-UniProtKB/TrEMBL;Acc-B9HUS6_POPTR] (338 aa)
   
 
  0.822
HMT4
Homocysteine S-methyltransferase 1 family protein; Homocysteine s-methyltransferase [source-UniProtKB/TrEMBL;Acc-B9HWH8_POPTR] (329 aa)
   
 
  0.819
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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