STRINGSTRING
POPTR_0001s11420.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s11420.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s11420.1Predicted protein (262 aa)    
Predicted Functional Partners:
POPTR_0003s09830.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGT2_POPTR] (405 aa)
     
        0.510
POPTR_0005s12300.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PI88_POPTR] (373 aa)
     
        0.489
POPTR_0003s20890.1
Predicted protein (344 aa)
     
        0.485
POPTR_0009s09970.1
Stress-enhanced protein 1 [source-UniProtKB/TrEMBL;Acc-B9HS51_POPTR] (145 aa)
     
        0.451
POPTR_0001s30840.1
Putative uncharacterized proteinStress enhanced protein 1 [source-UniProtKB/TrEMBL;Acc-A9PFE3_POPTR] (145 aa)
     
        0.439
POPTR_0013s00760.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGZ8_POPTR] (380 aa)
     
        0.429
POPTR_0013s15650.1
Predicted protein (231 aa)
     
        0.427
POPTR_0009s15870.1
Predicted protein (220 aa)
     
        0.421
POPTR_0001s12920.1
Predicted protein (245 aa)
     
   
  0.413
POPTR_0013s00930.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PES3_POPTR] (1065 aa)
     
        0.404
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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