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POPTR_0001s11660.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s11660.1" - NAC domain protein, IPR003441 [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s11660.1NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9GK44_POPTR] (247 aa)    
Predicted Functional Partners:
POPTR_1677s00200.1
Uncharacterized protein (321 aa)
     
        0.470
POPTR_0017s02500.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002336990.1] (361 aa)
     
        0.470
POPTR_0014s03320.1
Predicted protein; Lipolytic acyl hydrolase (LAH) (417 aa)
     
        0.470
POPTR_0009s10120.1
Predicted protein (491 aa)
     
        0.470
POPTR_0011s16550.1
Predicted protein (524 aa)
     
        0.464
POPTR_0014s10880.1
Multidrug/pheromone exporter, MDR family, ABC transporter family (1294 aa)
     
        0.454
POPTR_0228s00200.1
Uncharacterized protein (822 aa)
     
        0.441
POPTR_0004s01140.1
Predicted protein (117 aa)
     
        0.435
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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