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STRINGSTRING
GTE909 protein (Populus trichocarpa) - STRING interaction network
"GTE909" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTE909Uncharacterized protein; Global transcription factor group [source-UniProtKB/TrEMBL;Acc-B9GMZ4_POPTR] (392 aa)    
Predicted Functional Partners:
POPTR_0009s04270.1
Uncharacterized protein; Belongs to the SKP1 family (98 aa)
       
 
  0.807
POPTR_0014s11270.1
Myb family transcription factor family protein (443 aa)
     
 
  0.806
POPTR_0007s13760.1
Uncharacterized protein (1605 aa)
     
 
  0.780
POPTR_0005s11920.1
annotation not available (1524 aa)
     
 
  0.776
POPTR_0001s31330.1
SWIB complex BAF60b domain-containing family protein; Zinc ion binding;DNA binding (500 aa)
     
 
  0.733
POPTR_0006s19520.1
Ubiquitin family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PCX0_POPTR] (101 aa)
       
      0.720
POPTR_0013s00750.1
annotation not available (1578 aa)
     
 
  0.703
POPTR_0005s20820.1
Uncharacterized protein (786 aa)
     
 
  0.702
POPTR_0001s35610.1
Uncharacterized protein (231 aa)
     
 
  0.676
POPTR_0002s24730.1
Forkhead-associated domain-containing family protein (316 aa)
     
 
  0.665
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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