Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
CTD phosphatase-like protein 3 (1190 aa)
Predicted Functional Partners:
Transcription initiation factor IIF alpha subunit family protein (540 aa)
Transcription initiation factor IIF alpha subunit family protein (541 aa)
annotation not available (200 aa)
Uncharacterized protein (189 aa)
RNA polymerase Rpb7 N-terminal domain-containing family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGH2_POPTR] (176 aa)
DNA-directed RNA polymerase II 19 kDa polypeptide family protein (176 aa)
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1737 aa)
Uncharacterized protein (318 aa)
Transcription initiation factor IIB-1 family protein (312 aa)
Transcription initiation factor IIB-1 family protein (311 aa)
Your Current Organism:
NCBI taxonomy Id: 3694 Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar