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POPTR_0001s14660.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s14660.1" - Pleiotropic drug resistance, ABC transporter family protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s14660.1Pleiotropic drug resistance, ABC transporter family protein (1170 aa)    
Predicted Functional Partners:
POPTR_0009s05020.1
Uncharacterized protein (221 aa)
   
  0.734
POPTR_0003s04790.1
Predicted protein (108 aa)
   
  0.734
POPTR_0006s11590.1
Predicted protein (1463 aa)
   
0.716
POPTR_0017s07820.1
Uncharacterized protein (648 aa)
   
0.678
POPTR_0001s31890.1
White-brown-complex ABC transporter family (611 aa)
   
0.678
POPTR_0001s31880.1
Hypothetical protein (691 aa)
   
0.677
POPTR_0001s14630.1
Predicted protein (1407 aa)
   
0.671
POPTR_0008s09860.1
Pleiotropic drug resistance, ABC transporter family protein (300 aa)
   
0.669
POPTR_0003s04810.1
Annotation not available (132 aa)
   
0.662
POPTR_0003s17740.1
Pleiotropic drug resistance protein (1480 aa)
   
0.662
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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