STRINGSTRING
POPTR_0001s15620.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s15620.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s15620.1Uncharacterized protein (148 aa)    
Predicted Functional Partners:
POPTR_0019s10750.1
Annotation not available (354 aa)
   
  0.971
POPTR_0019s10740.1
Predicted protein (336 aa)
   
  0.971
POPTR_0005s10490.1
Hypothetical protein (1128 aa)
   
  0.971
POPTR_0014s12530.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P997_POPTR] (915 aa)
   
  0.970
POPTR_0009s04560.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.900
POPTR_0001s25490.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.900
POPTR_0001s22140.1
Predicted protein (981 aa)
   
 
  0.782
POPTR_0017s10670.1
Uncharacterized protein (1605 aa)
   
  0.780
POPTR_0015s13250.1
Predicted protein (541 aa)
   
  0.780
POPTR_0015s04270.1
Hypothetical protein (504 aa)
   
  0.780
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
Server load: low (14%) [HD]