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POPTR_0001s16230.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s16230.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
POPTR_0001s16230.1Predicted protein (235 aa)    
Predicted Functional Partners:
POPTR_0003s07070.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PD75_POPTR] (230 aa)
         
 
0.800
POPTR_0016s03700.1
Predicted protein (282 aa)
     
      0.709
POPTR_0006s03900.1
Predicted protein (284 aa)
     
      0.709
POPTR_0015s11460.1
Hypothetical protein (185 aa)
     
  0.634
POPTR_0012s10590.1
Predicted protein (194 aa)
     
  0.634
POPTR_0016s08640.1
Predicted protein (1545 aa)
       
    0.596
POPTR_0009s13670.1
Predicted protein (1895 aa)
       
    0.596
POPTR_0006s13410.1
Predicted protein (1574 aa)
       
    0.596
POPTR_0004s18060.1
Predicted protein (1877 aa)
       
    0.596
CNX5
Predicted protein; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from the pers [...] (464 aa)
       
    0.594
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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