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POPTR_0001s16820.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s16820.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s16820.1Predicted protein (981 aa)    
Predicted Functional Partners:
POPTR_0018s01420.1
Predicted protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.980
POPTR_0006s26660.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PD29_POPTR]; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.980
POPTR_0006s26650.1
Predicted protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.980
POPTR_0017s08450.1
Predicted protein (801 aa)
     
 
  0.961
POPTR_0001s32490.1
Predicted protein (805 aa)
     
 
  0.961
POPTR_0018s01400.1
Predicted protein (221 aa)
     
  0.905
POPTR_0003s06440.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002304096.1] (746 aa)
         
 
0.800
POPTR_0018s00720.1
Predicted protein (461 aa)
     
 
  0.788
POPTR_0006s25850.1
Predicted protein (463 aa)
     
 
  0.788
POPTR_0016s12730.1
Uncharacterized protein (182 aa)
     
  0.721
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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