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POPTR_0001s17670.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s17670.1" - 2-oxoglutarate-dependent dioxygenase [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s17670.12-oxoglutarate-dependent dioxygenase [source-UniProtKB/TrEMBL;Acc-B9GEI1_POPTR] (313 aa)    
Predicted Functional Partners:
POPTR_0005s20720.1
Predicted protein (340 aa)
   
        0.532
POPTR_0018s09400.1
2-oxoglutarate-dependent dioxygenase [source-UniProtKB/TrEMBL;Acc-B9ILT7_POPTR] (314 aa)
   
          0.522
POPTR_0005s11570.1
Flavanone 3-hydroxylase (F3H7), mRNA [source-RefSeq DNA_predicted;Acc-XM_002338838.1] (199 aa)
   
          0.522
POPTR_0186s00210.1
Annotation not available (323 aa)
   
        0.521
POPTR_0005s16180.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (899 aa)
     
   
  0.520
POPTR_0011s15420.1
Predicted protein (304 aa)
   
          0.519
POPTR_0002s08930.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (909 aa)
     
   
  0.518
POPTR_0005s24360.1
Predicted protein (374 aa)
   
          0.518
POPTR_0002s21750.1
1-aminocyclopropane-1-carboxylate [source-UniProtKB/TrEMBL;Acc-A9PHS1_POPTR] (311 aa)
   
          0.516
POPTR_0006s15610.1
1-aminocyclopropane-1-carboxylate [source-UniProtKB/TrEMBL;Acc-B9H8X0_POPTR] (303 aa)
   
          0.504
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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