Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Glycosyl transferase family 1 family protein (681 aa)
Predicted Functional Partners:
Uncharacterized protein (330 aa)
Glycosyltransferase family protein (330 aa)
Hexosyltransferase; Glycosyltransferase; Belongs to the glycosyltransferase 8 family (554 aa)
Hexosyltransferase; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P857_POPTR]; Belongs to the glycosyltransferase 8 family (554 aa)
Hexosyltransferase; Belongs to the glycosyltransferase 8 family (500 aa)
KRR1 family protein (622 aa)
Glycosyl transferase family 1 family protein (481 aa)
Uncharacterized protein; Glycosyltransferase, CAZy family GT47 (585 aa)
Uncharacterized protein (520 aa)
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
Your Current Organism:
NCBI taxonomy Id: 3694 Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar