STRINGSTRING
POPTR_0001s24700.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s24700.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s24700.1Predicted protein (145 aa)    
Predicted Functional Partners:
POPTR_0013s03940.1
Predicted protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (126 aa)
     
  0.986
POPTR_0005s05620.1
Predicted protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (126 aa)
     
  0.986
POPTR_0007s07470.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P9R0_POPTR] (158 aa)
     
  0.985
POPTR_0005s09240.1
Predicted protein (158 aa)
     
  0.985
POPTR_0010s15740.1
Predicted protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (192 aa)
     
  0.976
POPTR_0008s10300.1
Annotation not available (161 aa)
     
  0.976
POPTR_0008s10290.1
Hypothetical protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (101 aa)
     
  0.976
POPTR_0006s07950.1
Predicted protein (129 aa)
     
 
  0.949
POPTR_0019s05160.1
Tubulin alpha-8 chain [source-UniProtKB/TrEMBL;Acc-B9IPR1_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
  0.609
POPTR_0017s11740.1
Tubulin alpha-7 chain [source-UniProtKB/TrEMBL;Acc-B9IJV8_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (454 aa)
     
  0.609
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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