Full Link:
STRINGSTRING
POPTR_0001s25370.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s25370.1" - Hypothetical protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s25370.1Hypothetical protein (67 aa)    
Predicted Functional Partners:
POPTR_0012s03620.1
Predicted protein (95 aa)
     
  0.998
POPTR_0011s15280.1
Predicted protein (89 aa)
     
 
  0.988
POPTR_0001s45640.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PDK1_POPTR] (89 aa)
     
 
  0.988
POPTR_0010s26120.1
Predicted protein (145 aa)
     
  0.931
POPTR_0009s08020.1
Hypothetical protein (179 aa)
     
  0.893
POPTR_0006s05840.1
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (126 aa)
     
  0.893
POPTR_0001s28800.1
Uncharacterized protein (184 aa)
     
  0.893
POPTR_0015s11410.1
Predicted protein (78 aa)
     
 
  0.883
POPTR_0012s10520.1
Predicted protein (78 aa)
     
 
  0.883
POPTR_0017s04450.1
Predicted protein (379 aa)
     
  0.856
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
Server load: low (6%) [HD]