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POPTR_0001s26810.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s26810.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s26810.1Uncharacterized protein; Belongs to the protein kinase superfamily (415 aa)    
Predicted Functional Partners:
NTMC2T4.2
Calcium-dependent lipid-binding family protein; Integral membrane single C2 domain protein [source-UniProtKB/TrEMBL;Acc-B9IC33_POPTR] (500 aa)
       
 
  0.611
NTMC2T4.1
Calcium-dependent lipid-binding family protein; Integral membrane single C2 domain protein [source-UniProtKB/TrEMBL;Acc-B9GPS3_POPTR] (500 aa)
       
 
  0.611
POPTR_0015s01600.1
Uncharacterized protein (584 aa)
     
 
  0.492
POPTR_0014s09450.1
Uncharacterized protein (591 aa)
     
 
  0.492
POPTR_0012s02180.1
Uncharacterized protein (584 aa)
     
 
  0.492
POPTR_0001s10740.1
Phosphatidylinositol 3-and 4-kinase family protein (583 aa)
     
 
  0.492
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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