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POPTR_0001s27120.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s27120.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s27120.1Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1485 aa)    
Predicted Functional Partners:
POPTR_0009s06380.1
Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1482 aa)
   
0.996
POPTR_0006s03990.1
Condensin complex subunit 1 [source-UniProtKB/TrEMBL;Acc-B9H949_POPTR]; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1334 aa)
     
   
  0.995
POPTR_0005s27970.1
Predicted protein (383 aa)
     
   
  0.995
POPTR_0002s00470.1
Predicted protein (385 aa)
     
   
  0.995
POPTR_0003s01610.1
Predicted protein (713 aa)
     
 
  0.992
POPTR_0017s11460.1
High mobility group family [source-UniProtKB/TrEMBL;Acc-B9IJT6_POPTR] (610 aa)
     
 
  0.986
POPTR_0004s12290.1
High mobility group family [source-UniProtKB/TrEMBL;Acc-B9H0D7_POPTR] (644 aa)
     
 
  0.986
POPTR_0011s09520.1
Predicted protein (860 aa)
     
 
  0.981
POPTR_0001s37040.1
Predicted protein (877 aa)
     
 
  0.981
POPTR_0010s25320.1
Predicted protein (948 aa)
   
0.977
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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