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POPTR_0001s31280.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s31280.1" - Ammonium transporter [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s31280.1Ammonium transporter [source-UniProtKB/TrEMBL;Acc-B9GHA5_POPTR] (486 aa)    
Predicted Functional Partners:
POPTR_0015s01950.1
Predicted protein (2228 aa)
   
   
  0.813
POPTR_0012s01860.1
Predicted protein (2230 aa)
   
   
  0.813
POPTR_0016s03630.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PE46_POPTR] (1472 aa)
   
   
  0.777
POPTR_0006s03660.1
Predicted protein (1628 aa)
   
   
  0.777
POPTR_0005s16180.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (899 aa)
           
  0.698
POPTR_0002s08930.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (909 aa)
           
  0.686
POPTR_0002s19200.1
Predicted protein (201 aa)
 
   
  0.611
POPTR_0006s12280.1
Predicted protein (830 aa)
   
   
  0.527
POPTR_0799s00210.1
Annotation not available (125 aa)
   
   
  0.526
POPTR_0799s00200.1
Glutamine synthetase (234 aa)
   
   
  0.526
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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