Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Aminophospholipid ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily (1145 aa)
Predicted Functional Partners:
Uncharacterized protein (447 aa)
annotation not available (343 aa)
Starch synthase family protein (1092 aa)
GH3 family protein [source-UniProtKB/TrEMBL;Acc-B9GRX0_POPTR] (596 aa)
Uncharacterized protein (177 aa)
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PF41_POPTR] (168 aa)
Uncharacterized protein (178 aa)
Uncharacterized protein (1082 aa)
Calcium-dependent lipid-binding family protein; Integral membrane single C2 domain protein [source-UniProtKB/TrEMBL;Acc-B9IC33_POPTR] (500 aa)
Calcium-dependent lipid-binding family protein; Integral membrane single C2 domain protein [source-UniProtKB/TrEMBL;Acc-B9GPS3_POPTR] (500 aa)
Your Current Organism:
NCBI taxonomy Id: 3694 Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar