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POPTR_0001s35160.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s35160.1" - DNA methyltransferase [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
POPTR_0001s35160.1DNA methyltransferase [source-UniProtKB/TrEMBL;Acc-B9GI45_POPTR] (575 aa)    
Predicted Functional Partners:
POPTR_0001s28660.1
Predicted protein (178 aa)
     
      0.776
POPTR_0019s00240.1
DNA (cytosine-5)-methyltransferase AthI family protein (1576 aa)
       
  0.774
POPTR_0004s14140.1
DNA methyltransferase [source-UniProtKB/TrEMBL;Acc-B9H419_POPTR] (1529 aa)
       
  0.774
POPTR_0017s09900.1
Predicted protein; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking exp [...] (115 aa)
       
      0.769
POPTR_0009s07840.1
Predicted protein (178 aa)
       
      0.769
POPTR_0001s33800.1
Predicted protein; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking exp [...] (112 aa)
       
      0.769
POPTR_0018s02760.1
Predicted protein (553 aa)
     
      0.761
POPTR_0025s00610.1
Uncharacterized protein (587 aa)
     
      0.742
POPTR_0005s13810.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9H699_POPTR] (1428 aa)
     
  0.740
POPTR_0005s18340.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9H6I0_POPTR] (917 aa)
     
  0.736
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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