STRINGSTRING
POPTR_0001s35660.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s35660.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
POPTR_0001s35660.1Predicted protein (447 aa)    
Predicted Functional Partners:
POPTR_0011s07810.1
Uncharacterized protein (539 aa)
           
  0.447
POPTR_0004s05160.1
Predicted protein (558 aa)
           
  0.447
POPTR_0211s00200.1
Predicted protein (271 aa)
           
  0.443
POPTR_0017s08380.1
Predicted protein (414 aa)
           
  0.443
POPTR_0011s07270.1
Predicted protein (155 aa)
           
  0.443
POPTR_0010s10880.1
Tetratricopeptide repeat-containing family protein (324 aa)
           
  0.443
POPTR_0008s14270.1
Predicted protein (328 aa)
           
  0.443
POPTR_0001s32370.1
Predicted protein (415 aa)
           
  0.443
POPTR_0017s08500.1
Predicted protein (446 aa)
           
  0.440
POPTR_0010s11280.1
Predicted protein; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (336 aa)
           
  0.440
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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