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POPTR_0001s36630.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s36630.1" - Predicted protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s36630.1Predicted protein (512 aa)    
Predicted Functional Partners:
POPTR_0011s00840.1
Predicted protein (525 aa)
         
 
0.800
POPTR_0003s05510.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGM0_POPTR] (517 aa)
     
      0.620
POPTR_0001s17930.1
Predicted protein (469 aa)
     
      0.620
POPTR_0005s21040.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFJ4_POPTR] (568 aa)
     
  0.599
POPTR_0002s07240.1
Predicted protein (568 aa)
     
  0.599
POPTR_0019s04980.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P9J0_POPTR]; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (545 aa)
     
      0.581
POPTR_0013s05500.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PG05_POPTR]; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (545 aa)
     
      0.581
POPTR_0018s05850.1
Uncharacterized protein (122 aa)
         
  0.571
POPTR_0015s12470.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P9C3_POPTR] (200 aa)
         
  0.571
POPTR_0012s11850.1
Predicted protein (200 aa)
         
  0.571
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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