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POPTR_0001s38130.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s38130.1" - Cinnamyl alcohol dehydrogenase-like protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s38130.1Cinnamyl alcohol dehydrogenase-like protein (CADL11), mRNA [source-RefSeq DNA_predicted;Acc-XM_002300364.1] (246 aa)    
Predicted Functional Partners:
POPTR_0007s13720.1
Cytochrome P450 family protein; Coniferyl aldehyde 5-hydroxylase [source-UniProtKB/TrEMBL;Acc-B2Z6Q3_POPTR]; Belongs to the cytochrome P450 family (514 aa)
         
  0.774
POPTR_0005s11950.1
Cytochrome P450 family protein; Coniferyl aldehyde 5-hydroxylase [source-UniProtKB/TrEMBL;Acc-B2Z6Q4_POPTR]; Belongs to the cytochrome P450 family (513 aa)
         
  0.774
CCR2
Uncharacterized protein; Cinnamoyl CoA reductase [source-UniProtKB/TrEMBL;Acc-B9N9Z0_POPTR] (337 aa)
     
 
  0.725
CCR7
Cinnamoyl CoA reductase [source-UniProtKB/TrEMBL;Acc-B2Z6Q2_POPTR] (338 aa)
         
  0.713
POPTR_0001s14980.1
Uncharacterized protein (88 aa)
         
  0.713
CCR1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9I5M6_POPTR] (341 aa)
         
  0.713
POPTR_0001s14950.1
Uncharacterized protein (166 aa)
         
  0.713
POPTR_0001s14940.1
annotation not available (201 aa)
         
  0.713
CCR5
Uncharacterized protein; Cinnamoyl CoA reductase [source-UniProtKB/TrEMBL;Acc-B9GMB4_POPTR] (342 aa)
         
  0.713
POPTR_0001s14890.1
Uncharacterized protein (337 aa)
         
  0.713
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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