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POPTR_0001s38310.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s38310.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s38310.1Uncharacterized protein (464 aa)    
Predicted Functional Partners:
POPTR_0002s05840.1
4-hydroxyphenylpyruvate dioxygenase (444 aa)
 
 
  0.998
POPTR_0005s22680.1
Uncharacterized protein (254 aa)
   
 
  0.997
POPTR_0004s24090.1
Glutathione S-transferase zeta class family protein (225 aa)
 
 
  0.990
POPTR_0014s06520.1
Zeta class glutathione transferase GSTZ1 (216 aa)
 
 
  0.989
POPTR_0006s01080.1
Fumarylacetoacetase family protein (419 aa)
   
  0.986
POPTR_0016s01670.1
annotation not available (119 aa)
   
   
  0.979
POPTR_0009s01690.1
ISOVALERYL-COA-DEHYDROGENASE family protein (420 aa)
     
   
  0.920
POPTR_0005s23500.1
Methylcrotonoyl-CoA carboxylase family protein (760 aa)
     
   
  0.889
POPTR_0005s20770.1
Uncharacterized protein (380 aa)
   
   
  0.887
POPTR_0005s06500.1
Uncharacterized protein (478 aa)
   
   
  0.887
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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