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POPTR_0001s39920.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s39920.1" - Polyphenol oxidase [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s39920.1Polyphenol oxidase [source-UniProtKB/TrEMBL;Acc-B9N954_POPTR] (581 aa)    
Predicted Functional Partners:
POPTR_0011s04710.1
Polyphenol oxidase [source-UniProtKB/TrEMBL;Acc-B9HYL4_POPTR] (590 aa)
     
 
 
0.906
POPTR_1117s00200.1
Uncharacterized protein (314 aa)
         
    0.900
POPTR_0018s08910.1
Predicted protein (407 aa)
         
    0.900
POPTR_0018s02250.1
Predicted protein (466 aa)
         
    0.900
POPTR_0017s04600.1
Aminotransferase family protein [source-UniProtKB/TrEMBL;Acc-B9MYE9_POPTR] (417 aa)
         
    0.900
POPTR_0017s04590.1
Aminotransferase family protein (AMT1), mRNA [source-RefSeq DNA_predicted;Acc-XM_002328010.1] (339 aa)
         
    0.900
POPTR_0017s04570.1
Aminotransferase family protein [source-UniProtKB/TrEMBL;Acc-B9NGM4_POPTR] (418 aa)
         
    0.900
POPTR_0017s04560.1
Aminotransferase family protein [source-UniProtKB/TrEMBL;Acc-B9MYF1_POPTR] (419 aa)
         
    0.900
POPTR_0017s04550.1
Uncharacterized protein (419 aa)
         
    0.900
POPTR_0016s14060.1
Uncharacterized protein (304 aa)
         
    0.900
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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