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POPTR_0001s40670.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s40670.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s40670.1Uncharacterized protein (228 aa)    
Predicted Functional Partners:
POPTR_0005s22680.1
Uncharacterized protein (254 aa)
     
 
  0.977
POPTR_0002s05840.1
4-hydroxyphenylpyruvate dioxygenase (444 aa)
     
 
  0.977
POPTR_0001s38310.1
Uncharacterized protein (464 aa)
     
   
  0.819
POPTR_0274s00200.1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (392 aa)
 
 
  0.773
AD2
Uncharacterized protein; Arogenate dehydrogenase [source-UniProtKB/TrEMBL;Acc-B9N704_POPTR] (693 aa)
       
  0.725
PDTp
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (398 aa)
       
  0.719
PAL4
Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton (715 aa)
     
 
  0.708
PAL5
Phenylalanine ammonia-lyase [source-UniProtKB/TrEMBL;Acc-B2Z6R2_POPTR] (711 aa)
     
 
  0.708
PAL2
Phenylalanine ammonia-lyasePhenylalanine amonnia lyase [source-UniProtKB/TrEMBL;Acc-B2Z6R3_POPTR] (711 aa)
     
 
  0.708
PAL3
Phenylalanine ammonia-lyasePhenylalanine amonnia lyase [source-UniProtKB/TrEMBL;Acc-B2Z6R1_POPTR] (714 aa)
     
 
  0.708
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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