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POPTR_0001s44520.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s44520.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
POPTR_0001s44520.1Predicted protein (484 aa)    
Predicted Functional Partners:
POPTR_0011s15930.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PF16_POPTR] (290 aa)
     
      0.491
POPTR_0006s28810.1
Predicted protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (949 aa)
     
      0.486
POPTR_0021s01020.1
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (243 aa)
     
      0.484
POPTR_0001s46330.1
Uncharacterized protein (187 aa)
     
      0.472
POPTR_1770s00200.1
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (189 aa)
     
      0.471
POPTR_0006s15780.1
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (249 aa)
     
      0.471
POPTR_0004s24140.1
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (276 aa)
     
      0.471
POPTR_0004s01780.1
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (244 aa)
     
      0.471
POPTR_0014s15240.1
Predicted protein (411 aa)
     
 
  0.450
POPTR_0004s01220.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEF8_POPTR] (465 aa)
     
 
  0.450
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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